How Crohn's Disease Affects Your Mouth

Gastrointestinal (GI) symptoms are the hallmark of Crohn’s disease, but this autoimmune condition can affect any part of the digestive system, including the mouth.
Read on to learn how Crohn’s disease affects the mouth, the reasons behind these symptoms, and how to manage them.
Mouth Ulcers and Other Oral Symptoms of Crohn’s Disease

Mouth Ulcers
- Canker sores are not contagious; cold sores are.
- Canker sores only appear inside the mouth; cold sores can also develop outside the mouth.
- Canker sores show as a single, rounded sore; cold sores can also appear in clusters.
Other Mouth Symptoms of Crohn’s Disease
Besides ulcers, changes in and around the mouth that may be due to Crohn’s include:
- Angular cheilitis, which is cracked, red, sore skin at the corners of the mouth
- Gingivitis, or gum inflammation that can lead to bleeding, swelling, and redness (one of the most common mouth symptoms of Crohn’s disease in children)
- Foul-smelling breath
- Abscesses, or pus-filled lumps, that keep growing back
- Dental decay due to repeated vomiting
- Red, scaly skin around the lips
- Glossitis, or a swollen, inflamed tongue
Oral symptoms that are specific to Crohn’s disease include:
- Inflammation and redness in the groove between the cheeks and gums, an area known as the sulcus
- Long, narrow ulcers that often form straight lines in the gum, sulcus, and the insides of the cheeks
- Scar tissue on the lining of the mouth, sometimes also including small, fleshy lumps in the mouth called mucosal tags
Causes and Risk Factors for Crohn’s Mouth Symptoms
A number of risk factors make a person more likely to experience oral symptoms of Crohn’s disease.
Age
Certain Crohn’s Disease Medications
Disease Flare-Ups
How to Manage Crohn’s Disease Mouth Symptoms
Preventing and coping with mouth ulcers and other oral symptoms of Crohn’s disease can involve everything from prescription drugs to twice-a-day tooth-brushing.
Crohn’s Disease Medications
- Drugs that suppress immune activity, such as biologics
- Steroids to reduce inflammation during flares
- Pain medications
Medications and Home Treatments for Pain and Inflammation
- Pain-relieving mouth rinses like lidocaine
- Corticosteroid mouth rinses like dexamethasone to relieve inflammation and pain
- Topical products like benzocaine (Anbesol, Kank-A, Orabase), fluocinonide (Lidex, Vanos), and hydrogen peroxide (Orajel Antiseptic Mouth Sore Rinse, Peroxyl) for applying to a canker sore as soon as it appears
- Mouth rinse: Dissolve one teaspoon of baking soda in a half-cup of warm water or use salt water to rinse the mouth.
- Milk of magnesia: Apply to the sore a few times every day.
- Ice water: Hold some ice chips in your mouth on your sores to numb them.
Everyday Oral Hygiene
Staying on top of oral hygiene is key for a healthy mouth, but people with Crohn’s disease mouth symptoms may have to take extra measures to keep their teeth and gums healthy.
- Brush twice a day using fluoride toothpaste.?Choose products that don’t contain sodium lauryl sulfate. A higher-fluoride toothpaste might be necessary to manage dental health, particularly if dry mouth is a common Crohn’s disease symptom for you.
- Clean between the teeth daily.?Use floss, tape, or interdental brushes. Crohn’s disease can affect the joints, so people with joint issues or limited finger movement may want to try using a water flosser, which shoots mouthwash or water between the teeth to get rid of debris and plaque.
- Quit or avoid smoking.?Smoking damages teeth and gums. Plus it can trigger Crohn’s flares and contribute to mouth cancer lesions, which might be mistaken for Crohn’s disease mouth ulcers. Smoking might also reduce the effectiveness of some medications for Crohn’s disease by around half.
The Takeaway
- Crohn’s disease can cause mouth ulcers, cracked skin around the mouth, and other oral symptoms.
- Mouth ulcers can be the first sign of Crohn’s disease, especially in children.
- Work with your gastroenterologist and dentist to manage Crohn’s flares and the mouth symptoms that may develop from it.
Resources We Trust
- Mayo Clinic: Canker Sore
- Crohn’s & Colitis Foundation: Managing Flares
- Centers for Disease Control and Prevention: Living With IBD
- Crohn’s and Colitis Community: Online Support Programs
- Crohn's in Childhood Research Association: Emotional Well-Being for Young People With IBD

Yuying Luo, MD
Medical Reviewer
Yuying Luo, MD, is an assistant professor of medicine at Mount Sinai West and Morningside in New York City.?She aims to deliver evidence-based, patient-centered, and holistic care for her patients.
Her clinical and research focus includes patients with disorders of gut-brain interaction such as irritable bowel syndrome and functional dyspepsia; patients with lower gastrointestinal motility (constipation) disorders and defecatory and anorectal disorders (such as dyssynergic defecation); and women’s gastrointestinal health.
She graduated from Harvard with a bachelor's degree in molecular and cellular biology and received her MD from the NYU Grossman School of Medicine. She completed her residency in internal medicine at the Icahn School of Medicine at Mount Sinai, where she was also chief resident. She completed her gastroenterology fellowship at Mount Sinai Hospital and was also chief fellow.

Adam Felman
Author
As a hearing aid user and hearing loss advocate, Adam greatly values content that illuminates invisible disabilities. (He's also a music producer and loves the opportunity to explore the junction at which hearing loss and music collide head-on.)
In his spare time, Adam enjoys running along Worthing seafront, hanging out with his rescue dog, Maggie, and performing loop artistry for disgruntled-looking rooms of 10 people or less.
- Pecci-Lloret MP et al. Oral Manifestations of Crohn’s Disease: A Systematic Review. Journal of Clinical Medicine. October 10, 2023.
- Joshi S et al. Oral manifestations of inflammatory bowel disease: a guide to examination. BMJ. June 6, 2024.
- Cold Sores vs. Canker Sores: What Are They and How Do I Get Rid of ’Em? Penn Medicine. March 2, 2022.
- Oral manifestations of inflammatory bowel disease. DermnetNZ.
- Pecci-Lloret MP et al. Oral Manifestations of Crohn’s Disease: A Systematic Review. Journal of Clinical Medicine. October 10, 2023.
- Inflammatory Bowel Disease (IBD). Johns Hopkins Medicine.
- Canker sore. Mayo Clinic. April 3, 2018.
- Complications and Extraintestinal Manifestations. Crohn’s and Colitis Canada.
- Crohn’s and Colitis: How Can It Affect My Teeth. Oral Health Foundation.